Interface

The five SuperFast rate-law helper functions migrated from GasChem.jl@8c12c048482b515fb8eb2110bf8ab4b4f4e71309 src/SuperFast.jl — the reusable builder functions the SuperFast() chemical mechanism uses to construct the rate coefficient of every gas-phase reaction. Each is migrated as its own observed-only algebraic `models` entry: rate_toppb (SuperFast.jl:6) the constant-rate / `constant_k` converter, arrh (:33) the modified-Arrhenius workhorse, arr_3rd (:64) the third-body / Troe-falloff law, rate_2HO2 (:102) the HO2+HO2 law with water-vapour enhancement, and rate_OH_CO (:142) the JPL 15-10 OH+CO law. Upstream each function returns a one-variable ReactionSystem (`@variables k(t)`); the composed builders (arr_3rd, rate_2HO2, rate_OH_CO) compose `arrh` sub-systems. This file reproduces each function's compiled rate as a topologically-ordered cascade of `type: state` algebraic equations whose named intermediates mirror the upstream Julia locals and sub-system k's verbatim, with the Arrhenius coefficients exposed as `type: parameter` (defaults taken from the representative SuperFast reaction each builder serves). All five models are purely algebraic — no time derivatives — so each rate coefficient is constant in time. Units follow the upstream's mixed CGS / ppb system (rate coefficients in 1/(s*ppb), Arrhenius pre-exponentials in cm^3/molec/s).

The five SuperFast rate-law helper functions migrated from GasChem.jl@8c12c048482b515fb8eb2110bf8ab4b4f4e71309 src/SuperFast.jl — the reusable builder functions the SuperFast() chemical mechanism uses to construct the rate coefficient of every gas-phase reaction. Each is migrated as its own observed-only algebraic `models` entry: rate_toppb (SuperFast.jl:6) the constant-rate / `constant_k` converter, arrh (:33) the modified-Arrhenius workhorse, arr_3rd (:64) the third-body / Troe-falloff law, rate_2HO2 (:102) the HO2+HO2 law with water-vapour enhancement, and rate_OH_CO (:142) the JPL 15-10 OH+CO law. Upstream each function returns a one-variable ReactionSystem (`@variables k(t)`); the composed builders (arr_3rd, rate_2HO2, rate_OH_CO) compose `arrh` sub-systems. This file reproduces each function's compiled rate as a topologically-ordered cascade of `type: state` algebraic equations whose named intermediates mirror the upstream Julia locals and sub-system k's verbatim, with the Arrhenius coefficients exposed as `type: parameter` (defaults taken from the representative SuperFast reaction each builder serves). All five models are purely algebraic — no time derivatives — so each rate coefficient is constant in time. Units follow the upstream's mixed CGS / ppb system (rate coefficients in 1/(s*ppb), Arrhenius pre-exponentials in cm^3/molec/s).

Atmospheric interface for the Community Land Model Urban (CLMU) parameterization, following Chapter 1 of Oleson et al. (2010). Computes three diagnostic outputs from atmospheric forcing inputs: atmospheric vapor pressure (e_atm = q_atm P_atm / (epsilon + (1-epsilon) q_atm)), atmospheric air density (rho_atm = (P_atm - (1-epsilon) e_atm) / (R_da T_atm)), and the reference height for flux computations (z_atm = z_prime_atm + z_0 + z_d). Here epsilon = MW_wv/MW_da = 0.622 is the molecular-weight ratio of water vapor to dry air, and R_da = R_gas/MW_da is the specific gas constant for dry air. The urban canyon is represented as a roof + sunlit/shaded wall + pervious/impervious road five-column system; this component defines the atmospheric forcing interface that the rest of the canopy column reads. Migrated from UrbanCanopy.jl@9200edd4 src/clmu_introduction.jl:22 (`CLMUAtmosphere` @component). Parameterized as observed-only: forcings (q_atm, P_atm, T_atm, z_prime_atm, z_0, z_d, etc.) are inputs (parameters); e_atm, rho_atm, z_atm are the algebraic state outputs.

The five SuperFast rate-law helper functions migrated from GasChem.jl@8c12c048482b515fb8eb2110bf8ab4b4f4e71309 src/SuperFast.jl — the reusable builder functions the SuperFast() chemical mechanism uses to construct the rate coefficient of every gas-phase reaction. Each is migrated as its own observed-only algebraic `models` entry: rate_toppb (SuperFast.jl:6) the constant-rate / `constant_k` converter, arrh (:33) the modified-Arrhenius workhorse, arr_3rd (:64) the third-body / Troe-falloff law, rate_2HO2 (:102) the HO2+HO2 law with water-vapour enhancement, and rate_OH_CO (:142) the JPL 15-10 OH+CO law. Upstream each function returns a one-variable ReactionSystem (`@variables k(t)`); the composed builders (arr_3rd, rate_2HO2, rate_OH_CO) compose `arrh` sub-systems. This file reproduces each function's compiled rate as a topologically-ordered cascade of `type: state` algebraic equations whose named intermediates mirror the upstream Julia locals and sub-system k's verbatim, with the Arrhenius coefficients exposed as `type: parameter` (defaults taken from the representative SuperFast reaction each builder serves). All five models are purely algebraic — no time derivatives — so each rate coefficient is constant in time. Units follow the upstream's mixed CGS / ppb system (rate coefficients in 1/(s*ppb), Arrhenius pre-exponentials in cm^3/molec/s).

The five SuperFast rate-law helper functions migrated from GasChem.jl@8c12c048482b515fb8eb2110bf8ab4b4f4e71309 src/SuperFast.jl — the reusable builder functions the SuperFast() chemical mechanism uses to construct the rate coefficient of every gas-phase reaction. Each is migrated as its own observed-only algebraic `models` entry: rate_toppb (SuperFast.jl:6) the constant-rate / `constant_k` converter, arrh (:33) the modified-Arrhenius workhorse, arr_3rd (:64) the third-body / Troe-falloff law, rate_2HO2 (:102) the HO2+HO2 law with water-vapour enhancement, and rate_OH_CO (:142) the JPL 15-10 OH+CO law. Upstream each function returns a one-variable ReactionSystem (`@variables k(t)`); the composed builders (arr_3rd, rate_2HO2, rate_OH_CO) compose `arrh` sub-systems. This file reproduces each function's compiled rate as a topologically-ordered cascade of `type: state` algebraic equations whose named intermediates mirror the upstream Julia locals and sub-system k's verbatim, with the Arrhenius coefficients exposed as `type: parameter` (defaults taken from the representative SuperFast reaction each builder serves). All five models are purely algebraic — no time derivatives — so each rate coefficient is constant in time. Units follow the upstream's mixed CGS / ppb system (rate coefficients in 1/(s*ppb), Arrhenius pre-exponentials in cm^3/molec/s).

The five SuperFast rate-law helper functions migrated from GasChem.jl@8c12c048482b515fb8eb2110bf8ab4b4f4e71309 src/SuperFast.jl — the reusable builder functions the SuperFast() chemical mechanism uses to construct the rate coefficient of every gas-phase reaction. Each is migrated as its own observed-only algebraic `models` entry: rate_toppb (SuperFast.jl:6) the constant-rate / `constant_k` converter, arrh (:33) the modified-Arrhenius workhorse, arr_3rd (:64) the third-body / Troe-falloff law, rate_2HO2 (:102) the HO2+HO2 law with water-vapour enhancement, and rate_OH_CO (:142) the JPL 15-10 OH+CO law. Upstream each function returns a one-variable ReactionSystem (`@variables k(t)`); the composed builders (arr_3rd, rate_2HO2, rate_OH_CO) compose `arrh` sub-systems. This file reproduces each function's compiled rate as a topologically-ordered cascade of `type: state` algebraic equations whose named intermediates mirror the upstream Julia locals and sub-system k's verbatim, with the Arrhenius coefficients exposed as `type: parameter` (defaults taken from the representative SuperFast reaction each builder serves). All five models are purely algebraic — no time derivatives — so each rate coefficient is constant in time. Units follow the upstream's mixed CGS / ppb system (rate coefficients in 1/(s*ppb), Arrhenius pre-exponentials in cm^3/molec/s).